| Name | Version | Summary | date |
| enact-SO |
0.2.3 |
ENACT is a self-contained pipeline designed to streamline Visium HD analysis from cell segmentation to annotation, enabling integration with advanced spatial analysis tools. |
2025-02-05 21:49:16 |
| decoupler |
1.9.0 |
Ensemble of methods to infer biological activities from omics data |
2025-02-05 17:04:03 |
| omicscope |
1.4.6 |
OmicScope: from quantitative proteomics to systems biology. |
2024-12-05 11:42:58 |
| omilayers |
0.2.3 |
A SQLite and DuckDB wrapper suitable for bioinformatic analysis of multi-omic data. |
2024-10-22 08:47:56 |
| gemcat |
1.4.0 |
A toolbox for gene expression-based prediction of metabolic alterations |
2024-10-05 21:07:38 |
| pypath-omnipath |
0.16.17 |
Molecular signaling prior knowledge processing |
2024-10-02 12:21:35 |
| atlasapprox |
0.2.4 |
Cell atlas approximations, Python API |
2024-09-19 09:36:18 |
| networkcommons |
0.4.3 |
Integrated framework for network inference and evaluation using prior knowledge and omics data |
2024-09-17 15:25:05 |